Our Research Publications
Explore our cutting-edge research in computational epidemiology and infectious diseases.
Role of seasonal importation and genetic drift on selection for drug-resistant genotypes of Plasmodium falciparum in high-transmission settings.
Zupko RJ, Servadio JL, Nguyen TD, Tran TN-A, Tran KT, Somé AF, Boni MF
J R Soc Interface, 2024
Assessing emergence risk of double-resistant and triple-resistant genotypes of Plasmodium falciparum
Li EZ, Nguyen TD, Tran TN-A, Zupko RJ, Boni MF
Nature Communications, 2024
A combination of annual and nonannual forces drive respiratory disease in the tropics
Yang F, Servadio JL, Le Thanh NT, Lam HM, Choisy M, Thai PQ, Thao TTN, Vy NHT, Phuong HT, Nguyen TD, Tam DTH, Hanks EM, Vinh H, Bjornstad ON, Chau NVV, Boni MF
BMJ Global Health, 2023
Modeling policy interventions for slowing the spread of artemisinin-resistant pfkelch R561H mutations in Rwanda
Zupko RJ, Nguyen TD, Ngabonziza JCS, Kabera M, Li H, Tran TN-A, Tran TK, Uwimana A, Boni MF
Nature Medicine, 2023
Preventing antimalarial drug resistance with triple artemisinin-based combination therapies
Nguyen TD *, Gao B*, Amaratunga C, Dhorda M, Tran TN-A, White NJ, Dondorp AM, Boni MF*, Aguas R*
Nature Communications, 2023
* indicates equal contribution
View PublicationAntimalarial mass drug administration in large populations and the evolution of drug resistance
Nguyen TD *, Tran TN-A* , Parker DM, White NJ, Boni MF
PLoS Global Health, 2023
* indicates equal contribution
View PublicationNational-scale simulation of human movement in a spatially coupled individual-based model of malaria in Burkina Faso
Zupko RJ, Nguyen TD, Wesolowski A, Gerardin J, Boni MF
Scientific Report, 2023
Pre-existing partner-drug resistance facilitates the emergence and spread of artemisinin resistance: a consensus modelling
Watson OJ*, Gao B*, Nguyen TD*, Tran TN-A, Penny MA, Smith DL, Okell L, Aguas R, Boni MF
The Lancet Microbe, 2022
* indicates equal contribution
View PublicationLong-term effects of increased adoption of artemisinin combination therapies in Burkina Faso
Zupko RJ, Nguyen TD, Somé FA, Tran TN-A, Gerardin J, Dudas P, Giang DDH, Wesolowski A, Ouédraogo J-B, Boni MF
PLOS Global Public Health, 2022
Age-seroprevalence curves for the multi-strain structure of influenza A virus
Vinh DN, Nhat NTD, de Bruin E, Vy NHT, Thao TTN, Phuong HT, Anh PH, Todd S, Quan TM, Thanh NTL, Lien NTN, Ha NTH, Hong TTK, Thai PQ, Choisy M, Nguyen TD, Simmons CP, Thwaites GE, Clapham HE, Chau NVV, Koopmans M, Boni MF
Nature Communications, 2021
Non-annual seasonality of influenza-like illness in a tropical urban setting.
Lam HM, Wesolowski A, Hung NT, Nguyen TD, Nhat NTD, Todd S, Vinh DN, Vy NHT, Thao TTN, Thanh NTL, Tin PT, Minh NNQ, Bryant JE, Buckee CO, Ngoc TV, Chau NVV, Thwaites GE, Farrar J, Tam DTH, Vinh H, Boni MF
Influenza and Other Respiratory Viruses, 2018
The decline of malaria in Vietnam, 1991-2014
Goldlust SM, Thuan PD, Giang DDH, Thang ND, Nguyen TD, Thwaites GE, Farrar J, Thanh NV, Grenfell BT, Boni MF, Hien TT
Malaria Journal, 2018
Towards malaria elimination in Savannakhet, Lao PDR: Mathematical modelling driven strategy design
Tun STT, von Seidlein L, Pongvongsa T, Mayxay M, Saralamba S, Kyaw SS, Chanthavilay P, Celhay O, Nguyen TD, Tran TN-A, Parker DM, Boni MF, Dondorp AM, White LJ
Malaria Journal, 2018
Optimal population-level deployment of artemisinin combination therapies.
Nguyen TD, Olliaro P, Dondorp AM, Baird JK, Lam HM, Farrar J, Thwaites GE, White NJ, Boni MF
Lancet Global Health, 2015
Measuring the impact of artemisinin-based case management on malaria incidence in southern Vietnam, 1991-2010.
Peak C, Thuan PD, Britton A, Nguyen TD, Wolbers M, Thanh NV, Buckee CO, Boni MF
Am J Trop Med Hyg, 2015
Virulence attenuation during an influenza A/H5N1 pandemic.
Boni MF, Nguyen TD, de Jong MD, van Doorn HR
Phil Trans R Soc B, 2013
Early Pandemic influenza (2009 H1N1) in Ho Chi Minh City, Vietnam: A Clinical Virological and Epidemiological Analysis.
Hien TT, Boni MF, Bryant JE, Ngan TT, Wolbers M, Nguyen TD, Truong NT, Ha DQ, Hien VM, Nhu LNT, Thanh TT, Uyen LTT, Nhien PT, Chinh NT, Chau NVV, Farrar JJ, van Doorn HR
PLoS Med, 2010